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Related entries of code: 1ny2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ad8RCSB PDB    PDBbind36aa, >1AD8:L|PDBID|CHAIN|... at 100%
1gj5RCSB PDB    PDBbind36aa, >1GJ5:L|PDBID|CHAIN|... at 100%
1awfRCSB PDB    PDBbind36aa, >1AWF:L|PDBID|CHAIN|... at 100%
1awhRCSB PDB    PDBbind36aa, >1AWH:A|PDBID|CHAIN|... at 100%
1bhxRCSB PDB    PDBbind30aa, >1BHX:A|PDBID|CHAIN|... at 100%
1c1uRCSB PDB    PDBbind36aa, >1C1U:L|PDBID|CHAIN|... at 100%
1c1vRCSB PDB    PDBbind36aa, >1C1V:L|PDBID|CHAIN|... at 100%
1c5nRCSB PDB    PDBbind36aa, >1C5N:L|PDBID|CHAIN|... at 100%
1c5oRCSB PDB    PDBbind36aa, >1C5O:L|PDBID|CHAIN|... at 100%
1d6wRCSB PDB    PDBbind287aa, >1D6W:A|PDBID|CHAIN|... at 100%
1d9iRCSB PDB    PDBbind288aa, >1D9I:A|PDBID|CHAIN|... at 100%
1dojRCSB PDB    PDBbind11aa, >1DOJ:B|PDBID|CHAIN|... at 90%
1dwcRCSB PDB    PDBbind36aa, >1DWC:L|PDBID|CHAIN|... at 100%
1dwdRCSB PDB    PDBbind36aa, >1DWD:L|PDBID|CHAIN|... at 100%
1eb1RCSB PDB    PDBbind257aa, >1EB1:H|PDBID|CHAIN|... at 100%
1g30RCSB PDB    PDBbind36aa, >1G30:A|PDBID|CHAIN|... at 100%
1g32RCSB PDB    PDBbind36aa, >1G32:A|PDBID|CHAIN|... at 100%
1g37RCSB PDB    PDBbind287aa, >1G37:A|PDBID|CHAIN|... at 100%
1ghvRCSB PDB    PDBbind36aa, >1GHV:L|PDBID|CHAIN|... at 100%
1ghwRCSB PDB    PDBbind36aa, >1GHW:L|PDBID|CHAIN|... at 100%
1ghyRCSB PDB    PDBbind36aa, >1GHY:L|PDBID|CHAIN|... at 100%
1gj4RCSB PDB    PDBbind36aa, >1GJ4:L|PDBID|CHAIN|... at 100%
1hgtRCSB PDB    PDBbind36aa, >1HGT:L|PDBID|CHAIN|... at 100%
1jwtRCSB PDB    PDBbind305aa, >1JWT:A|PDBID|CHAIN|... *
1kttRCSB PDB    PDBbind36aa, >1KTT:A|PDBID|CHAIN|... at 100%
1mu6RCSB PDB    PDBbind36aa, >1MU6:A|PDBID|CHAIN|... at 100%
1mu8RCSB PDB    PDBbind36aa, >1MU8:A|PDBID|CHAIN|... at 100%
1mueRCSB PDB    PDBbind36aa, >1MUE:A|PDBID|CHAIN|... at 100%
1nm6RCSB PDB    PDBbind11aa, >1NM6:B|PDBID|CHAIN|... at 90%
1no9RCSB PDB    PDBbind36aa, >1NO9:L|PDBID|CHAIN|... at 100%
1o2gRCSB PDB    PDBbind36aa, >1O2G:L|PDBID|CHAIN|... at 100%
1o5gRCSB PDB    PDBbind36aa, >1O5G:L|PDBID|CHAIN|... at 100%
1uvsRCSB PDB    PDBbind36aa, >1UVS:L|PDBID|CHAIN|... at 100%
1qbvRCSB PDB    PDBbind36aa, >1QBV:L|PDBID|CHAIN|... at 100%
1qhrRCSB PDB    PDBbind36aa, >1QHR:A|PDBID|CHAIN|... at 100%
1qj1RCSB PDB    PDBbind36aa, >1QJ1:A|PDBID|CHAIN|... at 100%
1qj6RCSB PDB    PDBbind36aa, >1QJ6:A|PDBID|CHAIN|... at 100%
1qj7RCSB PDB    PDBbind36aa, >1QJ7:A|PDBID|CHAIN|... at 100%
1riwRCSB PDB    PDBbind36aa, >1RIW:A|PDBID|CHAIN|... at 100%
1sb1RCSB PDB    PDBbind29aa, >1SB1:L|PDBID|CHAIN|... at 100%
1sl3RCSB PDB    PDBbind11aa, >1SL3:B|PDBID|CHAIN|... at 90%
1t4vRCSB PDB    PDBbind26aa, >1T4V:L|PDBID|CHAIN|... at 100%
1tomRCSB PDB    PDBbind36aa, >1TOM:L|PDBID|CHAIN|... at 100%
1vr1RCSB PDB    PDBbind27aa, >1VR1:L|PDBID|CHAIN|... at 100%
1vzqRCSB PDB    PDBbind250aa, >1VZQ:H|PDBID|CHAIN|... at 99%
1w7gRCSB PDB    PDBbind259aa, >1W7G:H|PDBID|CHAIN|... at 100%
1wayRCSB PDB    PDBbind36aa, >1WAY:A|PDBID|CHAIN|... at 100%
1wbgRCSB PDB    PDBbind36aa, >1WBG:A|PDBID|CHAIN|... at 100%
1ypeRCSB PDB    PDBbind27aa, >1YPE:L|PDBID|CHAIN|... at 100%
1ypgRCSB PDB    PDBbind27aa, >1YPG:L|PDBID|CHAIN|... at 100%
1ypjRCSB PDB    PDBbind27aa, >1YPJ:L|PDBID|CHAIN|... at 100%
1z71RCSB PDB    PDBbind11aa, >1Z71:B|PDBID|CHAIN|... at 90%
1zgiRCSB PDB    PDBbind287aa, >1ZGI:A|PDBID|CHAIN|... at 100%
1zgvRCSB PDB    PDBbind287aa, >1ZGV:A|PDBID|CHAIN|... at 100%
2anmRCSB PDB    PDBbind257aa, >2ANM:H|PDBID|CHAIN|... at 100%
2bdyRCSB PDB    PDBbind289aa, >2BDY:A|PDBID|CHAIN|... at 100%
2cn0RCSB PDB    PDBbind257aa, >2CN0:H|PDBID|CHAIN|... at 100%
2bvsRCSB PDB    PDBbind259aa, >2BVS:H|PDBID|CHAIN|... at 100%
2bvxRCSB PDB    PDBbind259aa, >2BVX:H|PDBID|CHAIN|... at 100%
2bxtRCSB PDB    PDBbind259aa, >2BXT:H|PDBID|CHAIN|... at 100%
2bxuRCSB PDB    PDBbind259aa, >2BXU:H|PDBID|CHAIN|... at 100%
2cf8RCSB PDB    PDBbind257aa, >2CF8:H|PDBID|CHAIN|... at 100%
2cf9RCSB PDB    PDBbind257aa, >2CF9:H|PDBID|CHAIN|... at 100%
2gdeRCSB PDB    PDBbind36aa, >2GDE:L|PDBID|CHAIN|... at 100%
2h9tRCSB PDB    PDBbind36aa, >2H9T:L|PDBID|CHAIN|... at 100%
2jh0RCSB PDB    PDBbind36aa, >2JH0:C|PDBID|CHAIN|... at 100%
2jh5RCSB PDB    PDBbind36aa, >2JH5:C|PDBID|CHAIN|... at 100%
2jh6RCSB PDB    PDBbind36aa, >2JH6:C|PDBID|CHAIN|... at 100%
2pksRCSB PDB    PDBbind27aa, >2PKS:A|PDBID|CHAIN|... at 100%
2r2mRCSB PDB    PDBbind26aa, >2R2M:A|PDBID|CHAIN|... at 100%
2zc9RCSB PDB    PDBbind36aa, >2ZC9:L|PDBID|CHAIN|... at 100%
2zdaRCSB PDB    PDBbind36aa, >2ZDA:L|PDBID|CHAIN|... at 100%
2zfpRCSB PDB    PDBbind36aa, >2ZFP:L|PDBID|CHAIN|... at 100%
2zgxRCSB PDB    PDBbind36aa, >2ZGX:L|PDBID|CHAIN|... at 100%
2zo3RCSB PDB    PDBbind36aa, >2ZO3:L|PDBID|CHAIN|... at 100%
3c1kRCSB PDB    PDBbind11aa, >3C1K:B|PDBID|CHAIN|... at 90%
3f68RCSB PDB    PDBbind36aa, >3F68:L|PDBID|CHAIN|... at 100%
3bv9RCSB PDB    PDBbind31aa, >3BV9:A|PDBID|CHAIN|... at 100%
3da9RCSB PDB    PDBbind259aa, >3DA9:B|PDBID|CHAIN|... at 100%
3dhkRCSB PDB    PDBbind36aa, >3DHK:L|PDBID|CHAIN|... at 100%
3duxRCSB PDB    PDBbind36aa, >3DUX:L|PDBID|CHAIN|... at 100%
3egkRCSB PDB    PDBbind36aa, >3EGK:L|PDBID|CHAIN|... at 100%
3po1RCSB PDB    PDBbind102aa, >3PO1:C|PDBID|CHAIN|... at 100%
3utuRCSB PDB    PDBbind36aa, >3UTU:L|PDBID|CHAIN|... at 100%
4ax9RCSB PDB    PDBbind28aa, >4AX9:L|PDBID|CHAIN|... at 100%
4ayvRCSB PDB    PDBbind11aa, >4AYV:D|PDBID|CHAIN|... at 90%
4ayyRCSB PDB    PDBbind11aa, >4AYY:D|PDBID|CHAIN|... at 90%
4az2RCSB PDB    PDBbind11aa, >4AZ2:D|PDBID|CHAIN|... at 90%
4baoRCSB PDB    PDBbind259aa, >4BAO:B|PDBID|CHAIN|... at 100%
4e7rRCSB PDB    PDBbind36aa, >4E7R:M|PDBID|CHAIN|... at 100%
4hfpRCSB PDB    PDBbind259aa, >4HFP:D|PDBID|CHAIN|... at 99%
4loyRCSB PDB    PDBbind27aa, >4LOY:L|PDBID|CHAIN|... at 100%
4rn6RCSB PDB    PDBbind290aa, >4RN6:B|PDBID|CHAIN|... at 99%
7kmeRCSB PDB    PDBbind36aa, >7KME:L|PDBID|CHAIN|... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1h5vRCSB PDB    PDBbind5-mer
1apvRCSB PDB    PDBbind5-mer
1apwRCSB PDB    PDBbind5-mer
1b6jRCSB PDB    PDBbind5-mer
1bhfRCSB PDB    PDBbind5-mer
1cpiRCSB PDB    PDBbind5-mer
1f1jRCSB PDB    PDBbind5-mer
1f9eRCSB PDB    PDBbind5-mer
1fchRCSB PDB    PDBbind5-mer
1fivRCSB PDB    PDBbind5-mer
1fyrRCSB PDB    PDBbind5-mer
1gnyRCSB PDB    PDBbind5-mer
1gu3RCSB PDB    PDBbind5-mer
1h9lRCSB PDB    PDBbind5-mer
1hefRCSB PDB    PDBbind5-mer
1iauRCSB PDB    PDBbind5-mer
1jq8RCSB PDB    PDBbind5-mer
1jq9RCSB PDB    PDBbind5-mer
1k9qRCSB PDB    PDBbind5-mer
1m7iRCSB PDB    PDBbind5-mer
1mf4RCSB PDB    PDBbind5-mer
1mhwRCSB PDB    PDBbind5-mer
1nh0RCSB PDB    PDBbind5-mer
1o9dRCSB PDB    PDBbind5-mer
1p02RCSB PDB    PDBbind5-mer
1p03RCSB PDB    PDBbind5-mer
1p04RCSB PDB    PDBbind5-mer
1p05RCSB PDB    PDBbind5-mer
1p06RCSB PDB    PDBbind5-mer
1p10RCSB PDB    PDBbind5-mer
1pauRCSB PDB    PDBbind5-mer
1qm5RCSB PDB    PDBbind5-mer
1qtnRCSB PDB    PDBbind5-mer
1shdRCSB PDB    PDBbind5-mer
1t37RCSB PDB    PDBbind5-mer
1tmbRCSB PDB    PDBbind5-mer
1w9uRCSB PDB    PDBbind5-mer
1w9vRCSB PDB    PDBbind5-mer
1wawRCSB PDB    PDBbind5-mer
1wb0RCSB PDB    PDBbind5-mer
1ym4RCSB PDB    PDBbind5-mer
1zluRCSB PDB    PDBbind5-mer
1zm6RCSB PDB    PDBbind5-mer
2bcdRCSB PDB    PDBbind5-mer
2ce9RCSB PDB    PDBbind5-mer
2fguRCSB PDB    PDBbind5-mer
2fgvRCSB PDB    PDBbind5-mer
2h5dRCSB PDB    PDBbind5-mer
2h5iRCSB PDB    PDBbind5-mer
2h5jRCSB PDB    PDBbind5-mer
2j9aRCSB PDB    PDBbind5-mer
2k1qRCSB PDB    PDBbind5-mer
2l6jRCSB PDB    PDBbind5-mer
2lprRCSB PDB    PDBbind5-mer
2m0uRCSB PDB    PDBbind5-mer
2m0vRCSB PDB    PDBbind5-mer
2pcuRCSB PDB    PDBbind5-mer
2ql5RCSB PDB    PDBbind5-mer
2ql7RCSB PDB    PDBbind5-mer
2ql9RCSB PDB    PDBbind5-mer
2qlbRCSB PDB    PDBbind5-mer
2qlfRCSB PDB    PDBbind5-mer
2qljRCSB PDB    PDBbind5-mer
3atwRCSB PDB    PDBbind5-mer
3aycRCSB PDB    PDBbind5-mer
3c88RCSB PDB    PDBbind5-mer
3c89RCSB PDB    PDBbind5-mer
3c8aRCSB PDB    PDBbind5-mer
3c8bRCSB PDB    PDBbind5-mer
3chfRCSB PDB    PDBbind5-mer
3e7aRCSB PDB    PDBbind5-mer
3gjqRCSB PDB    PDBbind5-mer
3gjsRCSB PDB    PDBbind5-mer
3gjtRCSB PDB    PDBbind5-mer
3ibcRCSB PDB    PDBbind5-mer
3iqgRCSB PDB    PDBbind5-mer
3iqhRCSB PDB    PDBbind5-mer
3iqiRCSB PDB    PDBbind5-mer
3jzhRCSB PDB    PDBbind5-mer
3k05RCSB PDB    PDBbind5-mer
3k0hRCSB PDB    PDBbind5-mer
3k15RCSB PDB    PDBbind5-mer
3lprRCSB PDB    PDBbind5-mer
3mp1RCSB PDB    PDBbind5-mer
3ninRCSB PDB    PDBbind5-mer
3nzwRCSB PDB    PDBbind5-mer
3nzxRCSB PDB    PDBbind5-mer
3s8lRCSB PDB    PDBbind5-mer
3s8nRCSB PDB    PDBbind5-mer
3ov1RCSB PDB    PDBbind5-mer
3oveRCSB PDB    PDBbind5-mer
3oypRCSB PDB    PDBbind5-mer
3qw5RCSB PDB    PDBbind5-mer
3qw6RCSB PDB    PDBbind5-mer
3qw7RCSB PDB    PDBbind5-mer
3qw8RCSB PDB    PDBbind5-mer
3r7bRCSB PDB    PDBbind5-mer
3r7nRCSB PDB    PDBbind5-mer
3s8oRCSB PDB    PDBbind5-mer
3sxuRCSB PDB    PDBbind5-mer
3t6bRCSB PDB    PDBbind5-mer
3t6jRCSB PDB    PDBbind5-mer
3th0RCSB PDB    PDBbind5-mer
3u1iRCSB PDB    PDBbind5-mer
3u4wRCSB PDB    PDBbind5-mer
3vb4RCSB PDB    PDBbind5-mer
3vb5RCSB PDB    PDBbind5-mer
3vb7RCSB PDB    PDBbind5-mer
3wqvRCSB PDB    PDBbind5-mer
4czsRCSB PDB    PDBbind5-mer
4estRCSB PDB    PDBbind5-mer
4d8iRCSB PDB    PDBbind5-mer
4dktRCSB PDB    PDBbind5-mer
4gm3RCSB PDB    PDBbind5-mer
4gm8RCSB PDB    PDBbind5-mer
4i9cRCSB PDB    PDBbind5-mer
4j78RCSB PDB    PDBbind5-mer
4j81RCSB PDB    PDBbind5-mer
4j82RCSB PDB    PDBbind5-mer
4j84RCSB PDB    PDBbind5-mer
4k3mRCSB PDB    PDBbind5-mer
4kvmRCSB PDB    PDBbind5-mer
4l6tRCSB PDB    PDBbind5-mer
4lteRCSB PDB    PDBbind5-mer
4omcRCSB PDB    PDBbind5-mer
4omdRCSB PDB    PDBbind5-mer
4pryRCSB PDB    PDBbind5-mer
4ps0RCSB PDB    PDBbind5-mer
4ps1RCSB PDB    PDBbind5-mer
4q6fRCSB PDB    PDBbind5-mer
4rcpRCSB PDB    PDBbind5-mer
4rspRCSB PDB    PDBbind5-mer
4rydRCSB PDB    PDBbind5-mer
4sgaRCSB PDB    PDBbind5-mer
4whhRCSB PDB    PDBbind5-mer
4whlRCSB PDB    PDBbind5-mer
4wvsRCSB PDB    PDBbind5-mer
4wvuRCSB PDB    PDBbind5-mer
4x13RCSB PDB    PDBbind5-mer
4x9wRCSB PDB    PDBbind5-mer
4z5wRCSB PDB    PDBbind5-mer
4yecRCSB PDB    PDBbind5-mer
4yv8RCSB PDB    PDBbind5-mer
4z7qRCSB PDB    PDBbind5-mer
4zroRCSB PDB    PDBbind5-mer
5axiRCSB PDB    PDBbind5-mer
5bmmRCSB PDB    PDBbind5-mer
5btrRCSB PDB    PDBbind5-mer
5e3aRCSB PDB    PDBbind5-mer
5e8fRCSB PDB    PDBbind5-mer
5eldRCSB PDB    PDBbind5-mer
5eleRCSB PDB    PDBbind5-mer
5elfRCSB PDB    PDBbind5-mer
5f5bRCSB PDB    PDBbind5-mer
5h7hRCSB PDB    PDBbind5-mer
5icvRCSB PDB    PDBbind5-mer
5jr6RCSB PDB    PDBbind5-mer
5lprRCSB PDB    PDBbind5-mer
5n99RCSB PDB    PDBbind5-mer
5nwiRCSB PDB    PDBbind5-mer
5nwkRCSB PDB    PDBbind5-mer
5ttwRCSB PDB    PDBbind5-mer
6lprRCSB PDB    PDBbind5-mer
8lprRCSB PDB    PDBbind5-mer
5x54RCSB PDB    PDBbind5-mer
5yc1RCSB PDB    PDBbind5-mer
7lprRCSB PDB    PDBbind5-mer
9lprRCSB PDB    PDBbind5-mer

Entry Information
PDB ID1ny2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namethrombin light chain
Ligand Name5-mer
EC.Number E.C.3.4.21.5
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=1.75mM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary ReferenceAm J Physiol Heart Circ Physiol v285 pp. H183-93, 2003
Ligand Properties
Formula C18H33N7O5
Molecular Weight 427.499
Exact Mass 427.254
No. of atoms 63
No. of bonds 64
Polar Surface Area 200.67
LOGP Value -1.76      (Computed with XLOGP3)
-3.42      (Computed with Open Babel)
Drug likenessNo. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P28504  P01042  P00734  
Entrez Gene IDNCBI Entrez Gene ID: 3827  2147  
ASDInformation of known allosteric effects of PDB entries

 
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