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Related entries of code: 1o4n
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1a07RCSB PDB    PDBbind107aa, >1A07:B|PDBID|CHAIN|... at 99%
1a08RCSB PDB    PDBbind107aa, >1A08:B|PDBID|CHAIN|... at 99%
1a09RCSB PDB    PDBbind107aa, >1A09:B|PDBID|CHAIN|... at 99%
1a1bRCSB PDB    PDBbind107aa, >1A1B:B|PDBID|CHAIN|... at 99%
1a1cRCSB PDB    PDBbind107aa, >1A1C:B|PDBID|CHAIN|... at 99%
1a1eRCSB PDB    PDBbind107aa, >1A1E:B|PDBID|CHAIN|... at 99%
1is0RCSB PDB    PDBbind106aa, >1IS0:B|PDBID|CHAIN|... at 97%
1nlpRCSB PDB    PDBbind64aa, >1NLP:C|PDBID|CHAIN|... at 93%
1nzlRCSB PDB    PDBbind103aa, >1NZL:B|PDBID|CHAIN|... at 97%
1nzvRCSB PDB    PDBbind103aa, >1NZV:B|PDBID|CHAIN|... at 97%
1o41RCSB PDB    PDBbind108aa, >1O41:A|PDBID|CHAIN|... at 100%
1o42RCSB PDB    PDBbind108aa, >1O42:A|PDBID|CHAIN|... at 100%
1o43RCSB PDB    PDBbind108aa, >1O43:A|PDBID|CHAIN|... at 100%
1o44RCSB PDB    PDBbind108aa, >1O44:A|PDBID|CHAIN|... at 100%
1o45RCSB PDB    PDBbind108aa, >1O45:A|PDBID|CHAIN|... at 100%
1o46RCSB PDB    PDBbind108aa, >1O46:A|PDBID|CHAIN|... at 100%
1o47RCSB PDB    PDBbind108aa, >1O47:A|PDBID|CHAIN|... at 100%
1o48RCSB PDB    PDBbind108aa, >1O48:A|PDBID|CHAIN|... at 100%
1o49RCSB PDB    PDBbind108aa, >1O49:A|PDBID|CHAIN|... at 100%
1o4aRCSB PDB    PDBbind108aa, >1O4A:A|PDBID|CHAIN|... at 100%
1o4bRCSB PDB    PDBbind108aa, >1O4B:A|PDBID|CHAIN|... at 100%
1o4dRCSB PDB    PDBbind108aa, >1O4D:A|PDBID|CHAIN|... at 100%
1o4eRCSB PDB    PDBbind108aa, >1O4E:A|PDBID|CHAIN|... at 100%
1o4fRCSB PDB    PDBbind108aa, >1O4F:A|PDBID|CHAIN|... at 100%
1o4gRCSB PDB    PDBbind108aa, >1O4G:A|PDBID|CHAIN|... at 100%
1o4hRCSB PDB    PDBbind108aa, >1O4H:A|PDBID|CHAIN|... at 100%
1o4iRCSB PDB    PDBbind108aa, >1O4I:A|PDBID|CHAIN|... at 100%
1o4jRCSB PDB    PDBbind108aa, >1O4J:A|PDBID|CHAIN|... at 100%
1o4kRCSB PDB    PDBbind108aa, >1O4K:A|PDBID|CHAIN|... at 100%
1o4lRCSB PDB    PDBbind108aa, >1O4L:A|PDBID|CHAIN|... at 100%
1o4mRCSB PDB    PDBbind108aa, >1O4M:A|PDBID|CHAIN|... at 100%
1o4oRCSB PDB    PDBbind108aa, >1O4O:A|PDBID|CHAIN|... at 100%
1o4pRCSB PDB    PDBbind108aa, >1O4P:A|PDBID|CHAIN|... at 100%
1o4qRCSB PDB    PDBbind108aa, >1O4Q:A|PDBID|CHAIN|... at 100%
1o4rRCSB PDB    PDBbind108aa, >1O4R:A|PDBID|CHAIN|... at 100%
1prlRCSB PDB    PDBbind64aa, >1PRL:C|PDBID|CHAIN|... at 96%
1prmRCSB PDB    PDBbind64aa, >1PRM:C|PDBID|CHAIN|... at 96%
1rlpRCSB PDB    PDBbind64aa, >1RLP:C|PDBID|CHAIN|... at 96%
1rlqRCSB PDB    PDBbind64aa, >1RLQ:C|PDBID|CHAIN|... at 96%
1shdRCSB PDB    PDBbind107aa, >1SHD:A|PDBID|CHAIN|... at 99%
1skjRCSB PDB    PDBbind113aa, >1SKJ:A|PDBID|CHAIN|... at 90%
1y57RCSB PDB    PDBbind452aa, >1Y57:A|PDBID|CHAIN|... at 99%
2bdfRCSB PDB    PDBbind279aa, >2BDF:B|PDBID|CHAIN|... at 100%
2bdjRCSB PDB    PDBbind279aa, >2BDJ:A|PDBID|CHAIN|... at 100%
2h8hRCSB PDB    PDBbind535aa, >2H8H:A|PDBID|CHAIN|... *
2hwoRCSB PDB    PDBbind286aa, >2HWO:B|PDBID|CHAIN|... at 97%
2hwpRCSB PDB    PDBbind286aa, >2HWP:B|PDBID|CHAIN|... at 97%
2oiqRCSB PDB    PDBbind286aa, >2OIQ:B|PDBID|CHAIN|... at 98%
2qq7RCSB PDB    PDBbind286aa, >2QQ7:B|PDBID|CHAIN|... at 97%
2qlqRCSB PDB    PDBbind286aa, >2QLQ:B|PDBID|CHAIN|... at 97%
3el7RCSB PDB    PDBbind286aa, >3EL7:A|PDBID|CHAIN|... at 98%
3el8RCSB PDB    PDBbind286aa, >3EL8:B|PDBID|CHAIN|... at 98%
3f3tRCSB PDB    PDBbind286aa, >3F3T:B|PDBID|CHAIN|... at 97%
3f3uRCSB PDB    PDBbind286aa, >3F3U:B|PDBID|CHAIN|... at 97%
3f3vRCSB PDB    PDBbind286aa, >3F3V:B|PDBID|CHAIN|... at 97%
3f3wRCSB PDB    PDBbind286aa, >3F3W:B|PDBID|CHAIN|... at 97%
3g5dRCSB PDB    PDBbind286aa, >3G5D:B|PDBID|CHAIN|... at 97%
3g6gRCSB PDB    PDBbind286aa, >3G6G:B|PDBID|CHAIN|... at 98%
3g6hRCSB PDB    PDBbind286aa, >3G6H:B|PDBID|CHAIN|... at 97%
3lokRCSB PDB    PDBbind286aa, >3LOK:B|PDBID|CHAIN|... at 97%
3svvRCSB PDB    PDBbind286aa, >3SVV:B|PDBID|CHAIN|... at 97%
3u4wRCSB PDB    PDBbind275aa, >3U4W:A|PDBID|CHAIN|... at 99%
3u51RCSB PDB    PDBbind275aa, >3U51:B|PDBID|CHAIN|... at 99%
3uqfRCSB PDB    PDBbind286aa, >3UQF:B|PDBID|CHAIN|... at 98%
3uqgRCSB PDB    PDBbind286aa, >3UQG:B|PDBID|CHAIN|... at 98%
4dggRCSB PDB    PDBbind286aa, >4DGG:B|PDBID|CHAIN|... at 98%
4ficRCSB PDB    PDBbind286aa, >4FIC:B|PDBID|CHAIN|... at 98%
4hxjRCSB PDB    PDBbind60aa, >4HXJ:B|PDBID|CHAIN|... at 98%
4lggRCSB PDB    PDBbind270aa, >4LGG:B|PDBID|CHAIN|... at 98%
4lghRCSB PDB    PDBbind277aa, >4LGH:B|PDBID|CHAIN|... at 98%
4mcvRCSB PDB    PDBbind278aa, >4MCV:B|PDBID|CHAIN|... at 98%
4o2pRCSB PDB    PDBbind286aa, >4O2P:B|PDBID|CHAIN|... at 98%
4ybjRCSB PDB    PDBbind286aa, >4YBJ:B|PDBID|CHAIN|... at 98%
4ybkRCSB PDB    PDBbind286aa, >4YBK:A|PDBID|CHAIN|... at 98%
4u5jRCSB PDB    PDBbind286aa, >4U5J:B|PDBID|CHAIN|... at 98%
5bmmRCSB PDB    PDBbind286aa, >5BMM:B|PDBID|CHAIN|... at 98%
5d10RCSB PDB    PDBbind286aa, >5D10:B|PDBID|CHAIN|... at 97%
5d11RCSB PDB    PDBbind286aa, >5D11:B|PDBID|CHAIN|... at 97%
5d12RCSB PDB    PDBbind286aa, >5D12:B|PDBID|CHAIN|... at 97%
6f3fRCSB PDB    PDBbind455aa, >6F3F:A|PDBID|CHAIN|... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1o4n
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameproto-oncogene tyrosine-protein kinase src
Ligand NameOXD
EC.Number E.C.2.7.1.112
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)IC50>40mM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary ReferenceJ.Med.Chem. v46 pp. 5184-95, 2003
Ligand Properties
Formula C2H2O4
Molecular Weight 90.035
Exact Mass 89.995
No. of atoms 8
No. of bonds 7
Polar Surface Area 74.6
LOGP Value 1.52      (Computed with XLOGP3)
-0.84      (Computed with Open Babel)
Drug likenessNo. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P12931  
Entrez Gene IDNCBI Entrez Gene ID: 6714  
ASDInformation of known allosteric effects of PDB entries

 
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