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Related entries of code: 3d6q
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1afkRCSB PDB    PDBbind124aa, >1AFK:B|PDBID|CHAIN|... at 99%
1aflRCSB PDB    PDBbind124aa, >1AFL:B|PDBID|CHAIN|... at 99%
1j7zRCSB PDB    PDBbind104aa, >1J7Z:B|PDBID|CHAIN|... at 99%
1dfjRCSB PDB    PDBbind124aa, >1DFJ:E|PDBID|CHAIN|... at 99%
1j80RCSB PDB    PDBbind104aa, >1J80:B|PDBID|CHAIN|... at 99%
1j81RCSB PDB    PDBbind104aa, >1J81:B|PDBID|CHAIN|... at 99%
1jn4RCSB PDB    PDBbind124aa, >1JN4:B|PDBID|CHAIN|... at 99%
1jvuRCSB PDB    PDBbind124aa, >1JVU:B|PDBID|CHAIN|... at 99%
1o0fRCSB PDB    PDBbind124aa, >1O0F:B|PDBID|CHAIN|... at 99%
1o0hRCSB PDB    PDBbind124aa, >1O0H:B|PDBID|CHAIN|... at 99%
1o0mRCSB PDB    PDBbind124aa, >1O0M:B|PDBID|CHAIN|... at 99%
1o0nRCSB PDB    PDBbind124aa, >1O0N:B|PDBID|CHAIN|... at 99%
1o0oRCSB PDB    PDBbind124aa, >1O0O:B|PDBID|CHAIN|... at 99%
1qhcRCSB PDB    PDBbind124aa, >1QHC:B|PDBID|CHAIN|... at 99%
1rnmRCSB PDB    PDBbind124aa, >1RNM:E|PDBID|CHAIN|... at 99%
1rpfRCSB PDB    PDBbind124aa, >1RPF:A|PDBID|CHAIN|... at 99%
1u1bRCSB PDB    PDBbind124aa, >1U1B:B|PDBID|CHAIN|... at 99%
1w4oRCSB PDB    PDBbind124aa, >1W4O:B|PDBID|CHAIN|... at 99%
1w4pRCSB PDB    PDBbind124aa, >1W4P:B|PDBID|CHAIN|... at 99%
1w4qRCSB PDB    PDBbind124aa, >1W4Q:B|PDBID|CHAIN|... at 99%
1z6dRCSB PDB    PDBbind124aa, >1Z6D:B|PDBID|CHAIN|... at 99%
1z6sRCSB PDB    PDBbind124aa, >1Z6S:B|PDBID|CHAIN|... at 99%
2g8rRCSB PDB    PDBbind124aa, >2G8R:B|PDBID|CHAIN|... at 99%
2w5gRCSB PDB    PDBbind124aa, >2W5G:B|PDBID|CHAIN|... at 99%
2w5iRCSB PDB    PDBbind124aa, >2W5I:B|PDBID|CHAIN|... at 99%
2xogRCSB PDB    PDBbind124aa, >2XOG:B|PDBID|CHAIN|... at 99%
2xoiRCSB PDB    PDBbind124aa, >2XOI:B|PDBID|CHAIN|... at 99%
3d6oRCSB PDB    PDBbind124aa, >3D6O:B|PDBID|CHAIN|... at 99%
3d6pRCSB PDB    PDBbind124aa, >3D6P:B|PDBID|CHAIN|... at 99%
3d7bRCSB PDB    PDBbind124aa, >3D7B:B|PDBID|CHAIN|... at 99%
3d8yRCSB PDB    PDBbind124aa, >3D8Y:B|PDBID|CHAIN|... at 99%
3d8zRCSB PDB    PDBbind124aa, >3D8Z:B|PDBID|CHAIN|... at 99%
3dxgRCSB PDB    PDBbind124aa, >3DXG:B|PDBID|CHAIN|... at 99%
3dxhRCSB PDB    PDBbind124aa, >3DXH:B|PDBID|CHAIN|... at 99%
3lxoRCSB PDB    PDBbind124aa, >3LXO:A|PDBID|CHAIN|... at 99%
4g8vRCSB PDB    PDBbind124aa, >4G8V:B|PDBID|CHAIN|... at 99%
4g8yRCSB PDB    PDBbind124aa, >4G8Y:B|PDBID|CHAIN|... at 99%
4g90RCSB PDB    PDBbind124aa, >4G90:B|PDBID|CHAIN|... at 99%
4peqRCSB PDB    PDBbind124aa, >4PEQ:C|PDBID|CHAIN|... at 99%
4rskRCSB PDB    PDBbind124aa, >4RSK:A|PDBID|CHAIN|... at 96%
4wypRCSB PDB    PDBbind125aa, >4WYP:B|PDBID|CHAIN|... at 100%
4wyzRCSB PDB    PDBbind125aa, >4WYZ:B|PDBID|CHAIN|... at 100%
6rsaRCSB PDB    PDBbind124aa, >6RSA:A|PDBID|CHAIN|... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3d6q
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRibonuclease pancreatic
Ligand NameU3S
EC.Number E.C.3.1.27.5
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)Ki=172uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference(2009) J.Med.Chem. Vol. 52: pp. 932-942
Ligand Properties
Formula C14H22N3O5
Molecular Weight 312.342
Exact Mass 312.156
No. of atoms 44
No. of bonds 46
Polar Surface Area 108.99
LOGP Value -1.29      (Computed with XLOGP3)
-1.21      (Computed with Open Babel)
Drug likenessNo. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P61823  
Entrez Gene IDNCBI Entrez Gene ID: 282340  
ASDInformation of known allosteric effects of PDB entries

 
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