Browse entries in the PDBbind-CN Database

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Related entries of code: 1bxo
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1apvRCSB PDB    PDBbind323aa, >1APV_1|Chain... *
1apwRCSB PDB    PDBbind323aa, >1APW_1|Chain... at 100%
1bxqRCSB PDB    PDBbind323aa, >1BXQ_1|Chain... at 100%
1ppkRCSB PDB    PDBbind323aa, >1PPK_1|Chain... at 100%
1pplRCSB PDB    PDBbind323aa, >1PPL_1|Chain... at 100%
1ppmRCSB PDB    PDBbind323aa, >1PPM_1|Chain... at 100%
2webRCSB PDB    PDBbind323aa, >2WEB_1|Chain... at 100%
2wecRCSB PDB    PDBbind323aa, >2WEC_1|Chain... at 100%
2wedRCSB PDB    PDBbind323aa, >2WED_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1bxo
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namepenicillopepsin
Ligand NamePP7
EC.Number E.C.3.4.23.20
Resolution 0.95(Å)
Affinity (Kd/Ki/IC50)Ki=0.10nM
Release Year1998
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v37 pp. 16839-45, 1998
Ligand Properties
Formula C30H48N4O9P
Molecular Weight 639.697
Exact Mass 639.316
No. of atoms 92
No. of bonds 93
Polar Surface Area 205.98
LOGP Value 2.11      (Computed with XLOGP3)
3.15      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00798  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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