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Related entries of code: 1icj
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1bskRCSB PDB    PDBbind168aa, >1BSK_1|Chain... *
1g27RCSB PDB    PDBbind168aa, >1G27_1|Chains... at 100%
1g2aRCSB PDB    PDBbind168aa, >1G2A_1|Chains... at 100%
2ai8RCSB PDB    PDBbind168aa, >2AI8_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1icj
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namepeptide deformylase
Ligand NamePGO
EC.Number E.C.3.5.1.31
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Ki=6mM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v273 pp. 11413-6, 1998
Ligand Properties
Formula C18H38O10
Molecular Weight 414.488
Exact Mass 414.246
No. of atoms 66
No. of bonds 65
Polar Surface Area 114.3
LOGP Value -2.32      (Computed with XLOGP3)
-0.90      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 27
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A6K3  
Entrez Gene IDNCBI Entrez Gene ID: 61756399  947780  
ASDInformation of known allosteric effects of PDB entries

 
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