Browse entries in the PDBbind-CN Database

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Related entries of code: 1kf6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1kfyRCSB PDB    PDBbind119aa, >1KFY_4|Chains... at 100%
3p4qRCSB PDB    PDBbind119aa, >3P4Q_4|Chains... at 100%
3p4rRCSB PDB    PDBbind119aa, >3P4R_4|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2vr0RCSB PDB    PDBbindHQO

Entry Information
PDB ID1kf6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameE. coli Quinol-Fumarate Reductase
Ligand NameHQO
EC.Number E.C.1.3.99.1
Resolution 2.7(Å)
Affinity (Kd/Ki/IC50)Ki=0.2uM
Release Year2002
Protein/NA SequenceCheck fasta file
Primary Reference The Journal of biological chemistry. (2002) 277, pp. 16124-30
Ligand Properties
Formula C16H20NO2
Molecular Weight 258.335
Exact Mass 258.149
No. of atoms 39
No. of bonds 40
Polar Surface Area 46.5
LOGP Value 3.64      (Computed with XLOGP3)
4.50      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00363  P0A8Q0  P0A8Q3  P0AC47  
Entrez Gene IDNCBI Entrez Gene ID: 61753808  948667  61753806  948680  61734463  948668  61753807  948666  
ASDInformation of known allosteric effects of PDB entries

 
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