Browse entries in the PDBbind-CN Database

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Related entries of code: 1sz0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1syoRCSB PDB    PDBbind432aa, >1SYO_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1m6pRCSB PDB    PDBbindM6P
1syoRCSB PDB    PDBbindM6P

Entry Information
PDB ID1sz0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namecation-independent mannose 6-phosphate receptor
Ligand NameM6P
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd~1nM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v279 pp. 34000-9, 2004
Ligand Properties
Formula C6H14O9P
Molecular Weight 261.144
Exact Mass 261.038
No. of atoms 30
No. of bonds 30
Polar Surface Area 173.66
LOGP Value -4.40      (Computed with XLOGP3)
-3.54      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08169  
Entrez Gene IDNCBI Entrez Gene ID: 281849  
ASDInformation of known allosteric effects of PDB entries

 
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