Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1upf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1jlrRCSB PDB    PDBbind243aa, >1JLR_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6klkRCSB PDB    PDBbindURF

Entry Information
PDB ID1upf
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameuracil phosphoribosyltransferase
Ligand NameURF
EC.Number E.C.2.4.2.9
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=25uM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference EMBO J. v17 pp. 3219-32, 1998
Ligand Properties
Formula C4H3FN2O2
Molecular Weight 130.077
Exact Mass 130.018
No. of atoms 12
No. of bonds 12
Polar Surface Area 65.72
LOGP Value -0.66      (Computed with XLOGP3)
-0.80      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q26998  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com