Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1lv8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1a9qRCSB PDB    PDBbind282aa, >1A9Q_1|Chain... at 99%
1b8nRCSB PDB    PDBbind284aa, >1B8N_1|Chain... at 99%
1b8oRCSB PDB    PDBbind284aa, >1B8O_1|Chain... at 99%
1lvuRCSB PDB    PDBbind289aa, >1LVU_1|Chains... at 100%
1v48RCSB PDB    PDBbind289aa, >1V48_1|Chain... at 99%
1vfnRCSB PDB    PDBbind281aa, >1VFN_1|Chain... at 100%
3fucRCSB PDB    PDBbind284aa, >3FUC_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1lvuRCSB PDB    PDBbind9PP
Entry Information
PDB ID1lv8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namepurine nucleoside phosphorylase
Ligand Name9PP
EC.Number E.C.2.4.2.1
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Kd=3.5uM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v342 pp. 1015-32, 2004
Ligand Properties
Formula C9H16N6O4P
Molecular Weight 303.235
Exact Mass 303.097
No. of atoms 36
No. of bonds 37
Polar Surface Area 179.15
LOGP Value -2.31      (Computed with XLOGP3)
0.26      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P55859  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com