Browse entries in the PDBbind-CN Database

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Related entries of code: 1nw4
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1q1gRCSB PDB    PDBbind276aa, >1Q1G_1|Chains... at 100%
6aqsRCSB PDB    PDBbind246aa, >6AQS_1|Chain... at 98%
5zniRCSB PDB    PDBbind245aa, >5ZNI_1|Chain... at 99%
5zncRCSB PDB    PDBbind245aa, >5ZNC_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1b8oRCSB PDB    PDBbindIMH
1g2oRCSB PDB    PDBbindIMH
1pf7RCSB PDB    PDBbindIMH
1rr6RCSB PDB    PDBbindIMH
1rt9RCSB PDB    PDBbindIMH
2ff1RCSB PDB    PDBbindIMH
2ff2RCSB PDB    PDBbindIMH
2oc4RCSB PDB    PDBbindIMH
2oc9RCSB PDB    PDBbindIMH
2on6RCSB PDB    PDBbindIMH
2q7oRCSB PDB    PDBbindIMH
3b9gRCSB PDB    PDBbindIMH
Entry Information
PDB ID1nw4
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameuridine phosphorylase
Ligand NameIMH
EC.Number E.C.2.4.2.1
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=860pM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v279 pp. 18103-6, 2004
Ligand Properties
Formula C11H15N4O4
Molecular Weight 267.261
Exact Mass 267.109
No. of atoms 34
No. of bonds 36
Polar Surface Area 138.84
LOGP Value -2.30      (Computed with XLOGP3)
-1.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8I3X4  
Entrez Gene IDNCBI Entrez Gene ID: 812947  
ASDInformation of known allosteric effects of PDB entries
 
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