Browse entries in the PDBbind-CN Database

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Related entries of code: 2ai7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2aiaRCSB PDB    PDBbind203aa, >2AIA_1|Chain... at 100%
2aieRCSB PDB    PDBbind203aa, >2AIE_1|Chain... at 99%
3strRCSB PDB    PDBbind203aa, >3STR_1|Chain... at 98%
3svjRCSB PDB    PDBbind203aa, >3SVJ_1|Chain... at 98%
3sw8RCSB PDB    PDBbind203aa, >3SW8_1|Chain... at 98%
4eoxRCSB PDB    PDBbind203aa, >4EOX_1|Chain... at 98%
6ow7RCSB PDB    PDBbind202aa, >6OW7_1|Chains... at 98%
6ow2RCSB PDB    PDBbind202aa, >6OW2_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2ai8RCSB PDB    PDBbindSB7

Entry Information
PDB ID2ai7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namepeptide deformylase
Ligand NameSB7
EC.Number E.C.3.5.1.88
Resolution 2(Å)
Affinity (Kd/Ki/IC50)IC50=0.4uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Protein Sci. v12 pp. 349-60, 2003
Ligand Properties
Formula C10H16NO2
Molecular Weight 182.240
Exact Mass 182.118
No. of atoms 29
No. of bonds 29
Polar Surface Area 44.9
LOGP Value 1.50      (Computed with XLOGP3)
-0.16      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8DP79  
Entrez Gene IDNCBI Entrez Gene ID: 60233589  61429639  
ASDInformation of known allosteric effects of PDB entries

 
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