Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2c94
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2c92RCSB PDB    PDBbind160aa, >2C92_1|Chains... *
2c97RCSB PDB    PDBbind160aa, >2C97_1|Chains... at 100%
2c9bRCSB PDB    PDBbind160aa, >2C9B_1|Chains... at 100%
2c9dRCSB PDB    PDBbind160aa, >2C9D_1|Chains... at 100%
2vi5RCSB PDB    PDBbind160aa, >2VI5_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2c94
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Name6,7-dimethyl-8-ribityllumazine synthase
Ligand NameTSF
EC.Number E.C.2.5.1.9
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Kd=0.15uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference FEBS J.v273;pp.4790
Ligand Properties
Formula C15H24F2N4O10P
Molecular Weight 489.342
Exact Mass 489.120
No. of atoms 56
No. of bonds 57
Polar Surface Area 247.85
LOGP Value -4.23      (Computed with XLOGP3)
-3.24      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 14
No. of Nitrogen and Oxygen Atoms: 14
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P9WHE9  
Entrez Gene IDNCBI Entrez Gene ID: 886681  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com