Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2zoq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4qtbRCSB PDB    PDBbind380aa, >4QTB_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5ax3RCSB PDB    PDBbind5ID
6g33RCSB PDB    PDBbind5ID
6g34RCSB PDB    PDBbind5ID
6g39RCSB PDB    PDBbind5ID
6g3aRCSB PDB    PDBbind5ID
6jwaRCSB PDB    PDBbind5ID
6c67RCSB PDB    PDBbind5ID

Entry Information
PDB ID2zoq
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman mitogen-activated kinase ERK1
Ligand Name5ID
EC.Number E.C.2.7.11.24
Resolution 2.39(Å)
Affinity (Kd/Ki/IC50)IC50=0.9uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Biochem.Biophys.Res.Commun. Vol. 377: pp. 1123-1127
Ligand Properties
Formula C11H13IN4O4
Molecular Weight 392.150
Exact Mass 391.998
No. of atoms 33
No. of bonds 35
Polar Surface Area 126.65
LOGP Value -0.69      (Computed with XLOGP3)
-0.19      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P27361  
Entrez Gene IDNCBI Entrez Gene ID: 5595  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com