Browse entries in the PDBbind-CN Database

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Related entries of code: 2amt
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2gzlRCSB PDB    PDBbind159aa, >2GZL_1|Chain... at 100%
3elcRCSB PDB    PDBbind165aa, >3ELC_1|Chains... *
3eorRCSB PDB    PDBbind165aa, >3EOR_1|Chain... at 100%
3ernRCSB PDB    PDBbind165aa, >3ERN_1|Chains... at 100%
3esjRCSB PDB    PDBbind165aa, >3ESJ_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2amt
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Name2-c-methyl-d-erythritol 2,4-cyclodiphosphate
Ligand Name1AA
EC.Number E.C.4.6.1.12
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Kd=36uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Angew.Chem.Int.Ed.Engl. v45 pp. 1069-74, 2006
Ligand Properties
Formula C18H26N4O13P2
Molecular Weight 568.366
Exact Mass 568.097
No. of atoms 63
No. of bonds 65
Polar Surface Area 298.71
LOGP Value -3.58      (Computed with XLOGP3)
-0.58      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 14
No. of Nitrogen and Oxygen Atoms: 17
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P62617  
Entrez Gene IDNCBI Entrez Gene ID: 61754363  945057  
ASDInformation of known allosteric effects of PDB entries

 
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