Browse entries in the PDBbind-CN Database

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Related entries of code: 2e92
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2e91RCSB PDB    PDBbind340aa, >2E91_1|Chains... *
2e93RCSB PDB    PDBbind340aa, >2E93_1|Chains... at 100%
2e94RCSB PDB    PDBbind340aa, >2E94_1|Chains... at 100%
2e95RCSB PDB    PDBbind340aa, >2E95_1|Chains... at 100%
2z4wRCSB PDB    PDBbind340aa, >2Z4W_1|Chains... at 100%
2z4yRCSB PDB    PDBbind340aa, >2Z4Y_1|Chains... at 100%
2z4zRCSB PDB    PDBbind340aa, >2Z4Z_1|Chains... at 100%
2z50RCSB PDB    PDBbind340aa, >2Z50_1|Chains... at 100%
2z52RCSB PDB    PDBbind340aa, >2Z52_1|Chains... at 100%
2z78RCSB PDB    PDBbind340aa, >2Z78_1|Chains... at 100%
2z7hRCSB PDB    PDBbind340aa, >2Z7H_1|Chains... at 100%
2z7iRCSB PDB    PDBbind340aa, >2Z7I_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2vf6RCSB PDB    PDBbindM0N

Entry Information
PDB ID2e92
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGeranylgeranyl pyrophosphate synthetase
Ligand NameM0N
EC.Number E.C.2.5.1.30
Resolution 2.31(Å)
Affinity (Kd/Ki/IC50)Ki=0.13uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference PNAS. 2007, 104, 10022-10027.
Ligand Properties
Formula C9H14N2O7P2
Molecular Weight 324.164
Exact Mass 324.028
No. of atoms 34
No. of bonds 35
Polar Surface Area 186.09
LOGP Value -2.53      (Computed with XLOGP3)
-1.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q12051  
Entrez Gene IDNCBI Entrez Gene ID: 856036  
ASDInformation of known allosteric effects of PDB entries

 
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