Browse entries in the PDBbind-CN Database

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Related entries of code: 2ggx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2gguRCSB PDB    PDBbind160aa, >2GGU_1|Chains... *
2orkRCSB PDB    PDBbind160aa, >2ORK_1|Chains... at 100%
2os9RCSB PDB    PDBbind160aa, >2OS9_1|Chains... at 100%
2riaRCSB PDB    PDBbind160aa, >2RIA_1|Chains... at 100%
2ribRCSB PDB    PDBbind160aa, >2RIB_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2ggx
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namepulmonary surfactant-associated protein d
Ligand NameNPJ
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)IC50=0.32mM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v281 pp. 18008-14, 2006
Ligand Properties
Formula C18H25NO13
Molecular Weight 463.390
Exact Mass 463.133
No. of atoms 57
No. of bonds 59
Polar Surface Area 224.35
LOGP Value -2.55      (Computed with XLOGP3)
-2.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 14
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P35247  
Entrez Gene IDNCBI Entrez Gene ID: 6441  
ASDInformation of known allosteric effects of PDB entries

 
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