Browse entries in the PDBbind-CN Database

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Related entries of code: 3c2f
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3c2oRCSB PDB    PDBbind294aa, >3C2O_1|Chain... at 100%
3c2rRCSB PDB    PDBbind295aa, >3C2R_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3dkjRCSB PDB    PDBbindPRP

Entry Information
PDB ID3c2f
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameQAPRTase
Ligand NamePRP
EC.Number E.C.2.4.2.19
Resolution 2.35(Å)
Affinity (Kd/Ki/IC50)Kd=10.1mM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Biochemistry Vol. 47: pp. 4039-4050
Ligand Properties
Formula C5H16O14P3
Molecular Weight 393.093
Exact Mass 392.975
No. of atoms 38
No. of bonds 38
Polar Surface Area 279.99
LOGP Value -6.21      (Computed with XLOGP3)
-3.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 14
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P43619  
Entrez Gene IDNCBI Entrez Gene ID: 850608  
ASDInformation of known allosteric effects of PDB entries

 
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