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Related entries of code: 3hp9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3c94RCSB PDB    PDBbind482aa, >3C94_1|Chain... *
3hl8RCSB PDB    PDBbind482aa, >3HL8_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3hp9
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameExodeoxyribonuclease I
Ligand NameCF1
EC.Number E.C.3.1.11.1
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)Ki=26uM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Proc.Natl.Acad.Sci.USA Vol. 107: pp. 633-638
Ligand Properties
Formula C15H11ClF3NO3
Molecular Weight 345.701
Exact Mass 345.038
No. of atoms 34
No. of bonds 35
Polar Surface Area 58.56
LOGP Value 6.11      (Computed with XLOGP3)
4.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04995  
Entrez Gene IDNCBI Entrez Gene ID: 946529  
ASDInformation of known allosteric effects of PDB entries

 
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