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Related entries of code: 3hyf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3qinRCSB PDB    PDBbind150aa, >3QIN_1|Chain... at 100%
3qioRCSB PDB    PDBbind150aa, >3QIO_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3hyf
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHIV-1 RNase H p15
Ligand NameON1
EC.Number E.C.3.1.26.4
Resolution 1.7(Å)
Affinity (Kd/Ki/IC50)IC50=1.2uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) J.Med.Chem. Vol. 52: pp. 5781-5784
Ligand Properties
Formula C12H8Cl2N2O4
Molecular Weight 315.109
Exact Mass 313.986
No. of atoms 28
No. of bonds 29
Polar Surface Area 103.28
LOGP Value 3.15      (Computed with XLOGP3)
2.07      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q72547  P0A7Y4  
Entrez Gene IDNCBI Entrez Gene ID: 61755530  946955  
ASDInformation of known allosteric effects of PDB entries

 
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