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Related entries of code: 3k4d
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3lpfRCSB PDB    PDBbind605aa, >3LPF_1|Chains... at 100%
3lpgRCSB PDB    PDBbind605aa, >3LPG_1|Chains... at 100%
4jhzRCSB PDB    PDBbind603aa, >4JHZ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3k4d
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameE. coli beta-glucuronidase
Ligand NameEVA
EC.Number E.C.3.2.1.31
Resolution 2.39(Å)
Affinity (Kd/Ki/IC50)Ki=7750nM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Science Vol. 330: pp. 831-835
Ligand Properties
Formula C6H9NO6
Molecular Weight 191.139
Exact Mass 191.043
No. of atoms 22
No. of bonds 22
Polar Surface Area 127.09
LOGP Value -1.48      (Computed with XLOGP3)
-3.02      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P05804  
Entrez Gene IDNCBI Entrez Gene ID: 946149  
ASDInformation of known allosteric effects of PDB entries

 
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