Browse entries in the PDBbind-CN Database

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Related entries of code: 3mag
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1b42RCSB PDB    PDBbind297aa, >1B42_1|Chain... at 100%
1bkyRCSB PDB    PDBbind307aa, >1BKY_1|Chain... *
3mctRCSB PDB    PDBbind297aa, >3MCT_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2x6fRCSB PDB    PDBbind3MA

Entry Information
PDB ID3mag
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namevp39
Ligand Name3MA
EC.Number E.C.2.7.7.19
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Kd=86uM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference Proc.Natl.Acad.Sci.USA v96 pp. 7149-54, 1999
Ligand Properties
Formula C6H8N5
Molecular Weight 150.161
Exact Mass 150.078
No. of atoms 19
No. of bonds 20
Polar Surface Area 71.47
LOGP Value -0.12      (Computed with XLOGP3)
-0.05      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P07617  
Entrez Gene IDNCBI Entrez Gene ID: 3707551  
ASDInformation of known allosteric effects of PDB entries

 
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