Browse entries in the PDBbind-CN Database

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Related entries of code: 3ob0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3oayRCSB PDB    PDBbind224aa, >3OAY_2|Chains... at 100%
6mnfRCSB PDB    PDBbind224aa, >6MNF_2|Chains... at 100%
6msyRCSB PDB    PDBbind225aa, >6MSY_2|Chain... at 100%
6mu3RCSB PDB    PDBbind225aa, >6MU3_2|Chains... at 100%
6mubRCSB PDB    PDBbind226aa, >6MUB_2|Chains... *
6cxlRCSB PDB    PDBbind224aa, >6CXL_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3ob0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameFab 2G12
Ligand Name2M6
EC.Number E.C.-.-.-.-
Resolution 2.85(Å)
Affinity (Kd/Ki/IC50)IC50~1mM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Proc.Natl.Acad.Sci.USA Vol. 107: pp. 17107-17112
Ligand Properties
Formula C25H44O21
Molecular Weight 680.604
Exact Mass 680.238
No. of atoms 90
No. of bonds 93
Polar Surface Area 347.83
LOGP Value -6.94      (Computed with XLOGP3)
-9.36      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 14
No. of Hydrogen Bond Acceptors: 14
No. of Rotatable Bonds: 24
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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