Browse entries in the PDBbind-CN Database

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Related entries of code: 3u8h
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1db4RCSB PDB    PDBbind124aa, >1DB4_1|Chain... at 98%
1db5RCSB PDB    PDBbind124aa, >1DB5_1|Chain... at 98%
1j1aRCSB PDB    PDBbind124aa, >1J1A_1|Chains... at 98%
1kvoRCSB PDB    PDBbind124aa, >1KVO_1|Chains... at 98%
3u8dRCSB PDB    PDBbind124aa, >3U8D_1|Chains... at 98%
5g3nRCSB PDB    PDBbind127aa, >5G3N_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1j1aRCSB PDB    PDBbindBHP
Entry Information
PDB ID3u8h
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePhospholipase A2, membrane associated
Ligand NameBHP
EC.Number E.C.3.1.1.4
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)IC50=0.32uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Biol.Chem. Vol. 288: pp. 15269-15279
Ligand Properties
Formula C31H37NO4
Molecular Weight 487.630
Exact Mass 487.272
No. of atoms 73
No. of bonds 75
Polar Surface Area 75.63
LOGP Value 8.20      (Computed with XLOGP3)
6.74      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P14555  
Entrez Gene IDNCBI Entrez Gene ID: 5320  
ASDInformation of known allosteric effects of PDB entries
 
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