Browse entries in the PDBbind-CN Database

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Related entries of code: 3hfz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3hfvRCSB PDB    PDBbindMTY

Entry Information
PDB ID3hfz
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameThermus thermophilus Phenylalanyl-tRNA synthetase
Ligand NameMTY
EC.Number E.C.6.1.1.20
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Ki=13uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Proc.Natl.Acad.Sci.USA Vol. 106: pp. 11045-11048
Ligand Properties
Formula C9H12NO3
Molecular Weight 182.196
Exact Mass 182.082
No. of atoms 25
No. of bonds 25
Polar Surface Area 85.17
LOGP Value -0.88      (Computed with XLOGP3)
-0.37      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q5SGX1  Q5SGX2  
Entrez Gene IDNCBI Entrez Gene ID: 3169713  3169731  
ASDInformation of known allosteric effects of PDB entries

 
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