Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3usx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ng4RCSB PDB    PDBbind171aa, >3NG4_1|Chains... *
3nw3RCSB PDB    PDBbind171aa, >3NW3_1|Chains... at 100%
3o4kRCSB PDB    PDBbind171aa, >3O4K_1|Chains... at 100%
3ogxRCSB PDB    PDBbind171aa, >3OGX_1|Chains... at 100%
3rt4RCSB PDB    PDBbind171aa, >3RT4_1|Chains... at 100%
3t2vRCSB PDB    PDBbind171aa, >3T2V_1|Chains... at 100%
3uilRCSB PDB    PDBbind171aa, >3UIL_1|Chains... at 100%
3umqRCSB PDB    PDBbind171aa, >3UMQ_1|Chains... at 100%
4fnnRCSB PDB    PDBbind171aa, >4FNN_1|Chains... at 100%
5e0aRCSB PDB    PDBbind171aa, >5E0A_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3uevRCSB PDB    PDBbindMYR
3v2nRCSB PDB    PDBbindMYR
3w9kRCSB PDB    PDBbindMYR
4tkhRCSB PDB    PDBbindMYR

Entry Information
PDB ID3usx
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePeptidoglycan recognition protein 1
Ligand NameMYR
EC.Number E.C.-.-.-.-
Resolution 2.28(Å)
Affinity (Kd/Ki/IC50)Kd=9.53uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Arch.Biochem.Biophys. Vol. 529: pp. 1-10
Ligand Properties
Formula C14H28O2
Molecular Weight 228.371
Exact Mass 228.209
No. of atoms 44
No. of bonds 43
Polar Surface Area 37.3
LOGP Value 7.48      (Computed with XLOGP3)
4.77      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9GK12  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com