Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3vw0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3vvyRCSB PDB    PDBbind194aa, >3VVY_1|Chains... *
3vvzRCSB PDB    PDBbind194aa, >3VVZ_1|Chains... at 100%
3vw1RCSB PDB    PDBbind194aa, >3VW1_1|Chains... at 100%
3vw2RCSB PDB    PDBbind194aa, >3VW2_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3arpRCSB PDB    PDBbindDEQ
3artRCSB PDB    PDBbindDEQ
3bt9RCSB PDB    PDBbindDEQ
3btjRCSB PDB    PDBbindDEQ

Entry Information
PDB ID3vw0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePutative regulatory protein
Ligand NameDEQ
EC.Number E.C.-.-.-.-
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)Kd=21.2uM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Nat Commun Vol. 4: pp. 2078-2078
Ligand Properties
Formula C30H43N4
Molecular Weight 459.689
Exact Mass 459.349
No. of atoms 77
No. of bonds 80
Polar Surface Area 60.14
LOGP Value 6.69      (Computed with XLOGP3)
6.85      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 0
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0F6AY66  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com