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Related entries of code: 4mdt
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3nzkRCSB PDB    PDBbind311aa, >3NZK_1|Chains... *
3p3gRCSB PDB    PDBbind300aa, >3P3G_1|Chain... at 93%
3ps1RCSB PDB    PDBbind300aa, >3PS1_1|Chain... at 93%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4mdt
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
Ligand Name24G
EC.Number E.C.3.5.1
Resolution 2.59(Å)
Affinity (Kd/Ki/IC50)Kd<10uM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Biol.Chem. Vol. 288: pp. 34073-34080
Ligand Properties
Formula C29H54N3O18P2
Molecular Weight 794.696
Exact Mass 794.288
No. of atoms 106
No. of bonds 108
Polar Surface Area 364.2
LOGP Value -1.58      (Computed with XLOGP3)
-2.20      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 28
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A725  
Entrez Gene IDNCBI Entrez Gene ID: 61752657  944816  
ASDInformation of known allosteric effects of PDB entries

 
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