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Related entries of code: 4cp5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1buxRCSB PDB    PDBbind155aa, >1BUX_1|Chains... *
1hiyRCSB PDB    PDBbind155aa, >1HIY_1|Chains... at 100%
1mn9RCSB PDB    PDBbind155aa, >1MN9_1|Chains... at 99%
1s5zRCSB PDB    PDBbind155aa, >1S5Z_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4cp5
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namenucleoside diphosphate kinase (NDPK) H122G mutant
Ligand NameEOI
EC.Number E.C.2.7.4.6
Resolution 2.32(Å)
Affinity (Kd/Ki/IC50)Kd=452uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Antiviral Res. Vol. 117: pp. 122-131
Ligand Properties
Formula C9H18N5O9P3S
Molecular Weight 465.254
Exact Mass 465.004
No. of atoms 45
No. of bonds 46
Polar Surface Area 291.32
LOGP Value -3.27      (Computed with XLOGP3)
0.83      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 14
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P22887  
Entrez Gene IDNCBI Entrez Gene ID: 8618831  8619145  
ASDInformation of known allosteric effects of PDB entries

 
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