Browse entries in the PDBbind-CN Database

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Related entries of code: 4hym
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4hxzRCSB PDB    PDBbind390aa, >4HXZ_1|Chains... *
4hy1RCSB PDB    PDBbind390aa, >4HY1_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4gglRCSB PDB    PDBbindCJC
Entry Information
PDB ID4hym
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameTopoisomerase IV, subunit B
Ligand NameCJC
EC.Number E.C.5.99.1.3
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Ki=6nM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Bioorg.Med.Chem.Lett. Vol. 23: pp. 1529-1536
Ligand Properties
Formula C19H20ClN8OS
Molecular Weight 443.933
Exact Mass 443.117
No. of atoms 50
No. of bonds 54
Polar Surface Area 156.39
LOGP Value 2.29      (Computed with XLOGP3)
1.84      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0J9WZF0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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