Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4y24
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3oy8RCSB PDB    PDBbind134aa, >3OY8_2|Chain... at 99%
3oywRCSB PDB    PDBbind134aa, >3OYW_2|Chain... at 99%
3t2tRCSB PDB    PDBbind135aa, >3T2T_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5e89RCSB PDB    PDBbindTD2
5h9pRCSB PDB    PDBbindTD2
5h9qRCSB PDB    PDBbindTD2
Entry Information
PDB ID4y24
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman Galectin-1
Ligand NameTD2
EC.Number E.C.-.-.-.-
Resolution 2.32(Å)
Affinity (Kd/Ki/IC50)Kd=0.22uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Sci Rep Vol. 6: pp. 29457-29457
Ligand Properties
Formula C28H30F2N6O8S
Molecular Weight 648.635
Exact Mass 648.181
No. of atoms 75
No. of bonds 80
Polar Surface Area 226.56
LOGP Value 0.24      (Computed with XLOGP3)
-0.12      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 14
No. of Nitrogen and Oxygen Atoms: 14
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P09382  
Entrez Gene IDNCBI Entrez Gene ID: 3956  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com