Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4zh2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4kmuRCSB PDB    PDBbind91aa, >4KMU_4|Chains... *
4kn4RCSB PDB    PDBbind91aa, >4KN4_4|Chains... at 100%
4kn7RCSB PDB    PDBbind91aa, >4KN7_4|Chains... at 100%
4mexRCSB PDB    PDBbind91aa, >4MEX_4|Chains... at 100%
4xsxRCSB PDB    PDBbind91aa, >4XSX_4|Chains... at 100%
4xsyRCSB PDB    PDBbind91aa, >4XSY_4|Chains... at 100%
4xszRCSB PDB    PDBbind91aa, >4XSZ_4|Chains... at 100%
4zh3RCSB PDB    PDBbind91aa, >4ZH3_4|Chains... at 100%
4zh4RCSB PDB    PDBbind91aa, >4ZH4_4|Chains... at 100%
5uacRCSB PDB    PDBbind91aa, >5UAC_4|Chains... at 100%
5uahRCSB PDB    PDBbind91aa, >5UAH_4|Chains... at 100%
5ualRCSB PDB    PDBbind91aa, >5UAL_4|Chains... at 100%
5w1tRCSB PDB    PDBbind91aa, >5W1T_4|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4zh2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameEscherichia coli RNA polymerase, RNAP
Ligand Name4OB
EC.Number E.C.2.7.7.6
Resolution 4.2(Å)
Affinity (Kd/Ki/IC50)IC50=10uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Structure Vol. 23: pp. 1470-1481
Ligand Properties
Formula C14H11F3N2O
Molecular Weight 280.245
Exact Mass 280.082
No. of atoms 31
No. of bonds 32
Polar Surface Area 44.62
LOGP Value 3.90      (Computed with XLOGP3)
4.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00579  P0A7Z4  P0A800  P0A8T7  P0A8V2  
Entrez Gene IDNCBI Entrez Gene ID: 947567  62021014  947794  62024775  948160  61756340  948487  61756339  948488  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com