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Related entries of code: 5a5z
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4exsRCSB PDB    PDBbind272aa, >4EXS_1|Chains... *
6rmfRCSB PDB    PDBbind244aa, >6RMF_1|Chains... at 99%
6q2yRCSB PDB    PDBbind244aa, >6Q2Y_1|Chains... at 100%
6q30RCSB PDB    PDBbind244aa, >6Q30_1|Chains... at 100%
6ovzRCSB PDB    PDBbind235aa, >6OVZ_1|Chains... at 100%
6mduRCSB PDB    PDBbind233aa, >6MDU_1|Chain... at 98%
6ibvRCSB PDB    PDBbind244aa, >6IBV_1|Chains... at 100%
6ibsRCSB PDB    PDBbind244aa, >6IBS_1|Chains... at 100%
6efjRCSB PDB    PDBbind233aa, >6EFJ_1|Chain... at 98%
6d1kRCSB PDB    PDBbind233aa, >6D1K_1|Chain... at 98%
6d1iRCSB PDB    PDBbind233aa, >6D1I_1|Chain... at 98%
6d1jRCSB PDB    PDBbind233aa, >6D1J_1|Chain... at 98%
6d1hRCSB PDB    PDBbind233aa, >6D1H_1|Chain... at 98%
6d1gRCSB PDB    PDBbind233aa, >6D1G_1|Chain... at 98%
6d1dRCSB PDB    PDBbind233aa, >6D1D_1|Chain... at 98%
6d1bRCSB PDB    PDBbind233aa, >6D1B_1|Chain... at 98%
6d1aRCSB PDB    PDBbind233aa, >6D1A_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5a5z
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBETA-LACTAMASE NDM-1
Ligand NameWJZ
EC.Number E.C.3.5.2.6
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)IC50=84uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Med.Chem. Vol. 58: pp. 3626
Ligand Properties
Formula C5H9NO3S
Molecular Weight 163.195
Exact Mass 163.030
No. of atoms 19
No. of bonds 18
Polar Surface Area 105.2
LOGP Value 0.74      (Computed with XLOGP3)
-0.10      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C7C422  
Entrez Gene IDNCBI Entrez Gene ID: 61419528  
ASDInformation of known allosteric effects of PDB entries

 
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