Browse entries in the PDBbind-CN Database

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Related entries of code: 5cc2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2v3uRCSB PDB    PDBbind265aa, >2V3U_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5cc2
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameligand binding domain of ionotropic glutamate receptor like GLUD2
Ligand NameCKA
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Kd=80uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Mol.Pharmacol. Vol. 89: pp. 253-262
Ligand Properties
Formula C10H6ClNO3
Molecular Weight 223.613
Exact Mass 223.004
No. of atoms 21
No. of bonds 22
Polar Surface Area 66.73
LOGP Value 2.59      (Computed with XLOGP3)
1.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q63226  
Entrez Gene IDNCBI Entrez Gene ID: 79220  
ASDInformation of known allosteric effects of PDB entries

 
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