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Related entries of code: 5hn7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ldwRCSB PDB    PDBbind396aa, >3LDW_1|Chains... *
3rbmRCSB PDB    PDBbind396aa, >3RBM_1|Chains... at 100%
3rywRCSB PDB    PDBbind396aa, >3RYW_1|Chains... at 100%
5hn8RCSB PDB    PDBbind375aa, >5HN8_1|Chains... at 100%
5hn9RCSB PDB    PDBbind375aa, >5HN9_1|Chains... at 100%
5hnaRCSB PDB    PDBbind375aa, >5HNA_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5hn7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePlasmodium vivax geranylgeranylpyrophosphate synthase
Ligand Name04M
EC.Number E.C.-.-.-.-
Resolution 2.15(Å)
Affinity (Kd/Ki/IC50)IC50=120uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochemistry Vol. 55: pp. 5180-5190
Ligand Properties
Formula C26H35NO7S
Molecular Weight 505.624
Exact Mass 505.213
No. of atoms 70
No. of bonds 72
Polar Surface Area 110.75
LOGP Value 6.16      (Computed with XLOGP3)
5.74      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A5K4U6  
Entrez Gene IDNCBI Entrez Gene ID: 5474697  
ASDInformation of known allosteric effects of PDB entries

 
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