Browse entries in the PDBbind-CN Database

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Related entries of code: 5k51
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5jsqRCSB PDB    PDBbind216aa, >5JSQ_1|Chains... *
5kamRCSB PDB    PDBbind216aa, >5KAM_1|Chains... at 100%
5kapRCSB PDB    PDBbind216aa, >5KAP_1|Chains... at 100%
6apsRCSB PDB    PDBbind216aa, >6APS_1|Chains... at 100%
6aptRCSB PDB    PDBbind216aa, >6APT_1|Chains... at 100%
6apuRCSB PDB    PDBbind216aa, >6APU_1|Chains... at 100%
6apvRCSB PDB    PDBbind216aa, >6APV_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5k51
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTrypanosome brucei Hypoxanthine-guanine phosphoribosyltranferase (TbrHGPRT)
Ligand Name6QD
EC.Number E.C.2.4.2.8
Resolution 2.96(Å)
Affinity (Kd/Ki/IC50)Ki=15.8uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Sci Rep Vol. 6: pp. 35894-35894
Ligand Properties
Formula C10H16N4O4P
Molecular Weight 287.232
Exact Mass 287.091
No. of atoms 35
No. of bonds 36
Polar Surface Area 137.85
LOGP Value -1.52      (Computed with XLOGP3)
0.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q07010  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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