Browse entries in the PDBbind-CN Database

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Related entries of code: 5lvq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1wugRCSB PDB    PDBbind118aa, >1WUG_1|Chain... at 96%
1wumRCSB PDB    PDBbind118aa, >1WUM_1|Chain... at 96%
5fdzRCSB PDB    PDBbind119aa, >5FDZ_1|Chains... at 100%
5fe6RCSB PDB    PDBbind119aa, >5FE6_1|Chains... at 100%
5fe7RCSB PDB    PDBbind119aa, >5FE7_1|Chains... at 100%
5fe9RCSB PDB    PDBbind119aa, >5FE9_1|Chains... at 100%
5lvrRCSB PDB    PDBbind119aa, >5LVR_1|Chains... at 100%
5mkxRCSB PDB    PDBbind119aa, >5MKX_1|Chains... at 100%
5ml0RCSB PDB    PDBbind110aa, >5ML0_1|Chain... at 91%
6j3oRCSB PDB    PDBbind140aa, >6J3O_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4nrbRCSB PDB    PDBbind2LX

Entry Information
PDB ID5lvq
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namep300/CBP-associated factor
Ligand Name2LX
EC.Number E.C.-.-.-.-
Resolution 2.05(Å)
Affinity (Kd/Ki/IC50)Kd=73uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) ACS Med Chem Lett Vol. 7: pp. 1213-1218
Ligand Properties
Formula C13H17NO3
Molecular Weight 235.279
Exact Mass 235.121
No. of atoms 34
No. of bonds 35
Polar Surface Area 47.56
LOGP Value 1.58      (Computed with XLOGP3)
1.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q92831  
Entrez Gene IDNCBI Entrez Gene ID: 8850  
ASDInformation of known allosteric effects of PDB entries

 
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