Browse entries in the PDBbind-CN Database

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Related entries of code: 6aox
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5lneRCSB PDB    PDBbind164aa, >5LNE_1|Chains... at 100%
6as8RCSB PDB    PDBbind166aa, >6AS8_1|Chains... at 100%
6aroRCSB PDB    PDBbind166aa, >6ARO_1|Chains... at 100%
6arnRCSB PDB    PDBbind166aa, >6ARN_1|Chains... at 100%
6aoyRCSB PDB    PDBbind166aa, >6AOY_1|Chains... at 100%
6armRCSB PDB    PDBbind166aa, >6ARM_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6aox
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameFml fimbrial adhesin FmlD
Ligand NameTF0
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=15uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Proc.Natl.Acad.Sci.USA Vol. 115: pp. E2819-E2828
Ligand Properties
Formula C14H25NO11
Molecular Weight 383.348
Exact Mass 383.143
No. of atoms 51
No. of bonds 52
Polar Surface Area 198.4
LOGP Value -4.18      (Computed with XLOGP3)
-4.86      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 8
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q1RBS0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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