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Related entries of code: 1mn9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1buxRCSB PDB    PDBbind155aa, >1BUX_1|Chains... *
1hiyRCSB PDB    PDBbind155aa, >1HIY_1|Chains... at 100%
1s5zRCSB PDB    PDBbind155aa, >1S5Z_1|Chains... at 100%
4cp5RCSB PDB    PDBbind155aa, >4CP5_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1mn9
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namenucleoside diphosphate kinase
Ligand NameRTP
EC.Number E.C.2.7.4.6
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Kd=24uM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference MOL.PHARMACOL. v63 pp. 538-46, 2003
Ligand Properties
Formula C8H18N4O14P3
Molecular Weight 487.168
Exact Mass 487.003
No. of atoms 47
No. of bonds 48
Polar Surface Area 333.56
LOGP Value -6.56      (Computed with XLOGP3)
-3.27      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 18
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P22887  
Entrez Gene IDNCBI Entrez Gene ID: 8618831  8619145  
ASDInformation of known allosteric effects of PDB entries

 
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