Browse entries in the PDBbind-CN Database

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Related entries of code: 2qdt
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2fu8RCSB PDB    PDBbind269aa, >2FU8_1|Chains... at 100%
2gfjRCSB PDB    PDBbind269aa, >2GFJ_1|Chains... at 100%
2gfkRCSB PDB    PDBbind269aa, >2GFK_1|Chains... at 100%
2hb9RCSB PDB    PDBbind269aa, >2HB9_1|Chain... at 100%
5dpxRCSB PDB    PDBbind269aa, >5DPX_1|Chains... at 100%
5evbRCSB PDB    PDBbind271aa, >5EVB_1|Chain... *
5evdRCSB PDB    PDBbind271aa, >5EVD_1|Chain... at 100%
5evkRCSB PDB    PDBbind271aa, >5EVK_1|Chain... at 100%
5hh6RCSB PDB    PDBbind271aa, >5HH6_1|Chain... at 100%
5hh5RCSB PDB    PDBbind271aa, >5HH5_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2qdt
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameL1鈥揨n2
Ligand NameI38
EC.Number E.C.3.5.2.6
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Ki=6.5uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Org.Biomol.Chem. Vol. 6: pp. 2282-2294
Ligand Properties
Formula C6H11NO3S
Molecular Weight 177.221
Exact Mass 177.046
No. of atoms 22
No. of bonds 21
Polar Surface Area 105.2
LOGP Value 0.64      (Computed with XLOGP3)
0.29      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P52700  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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